DSE People
Holly M. Simon
E-mail: simonh@ebs.ogi.edu
Phone: 503-748-1873
Fax: 503-748-1273
Alt Phone: 503-748-1126 (lab)
Web Site: http://www.ebs.ogi.edu/simonh/
Environmental and Biomolecular Systems
Affiliate Scientist, Center for Coastal Margin Observation and Prediction
Ph.D., Bacteriology, University of Wisconsin-Madison, 1996
- University of Wisconsin-Madison, Department of Plant pathology; Research Associate 1996-2000, Assistant Scientist, 2000-2004
- OHSU/OGI School of Science & Technology, Visiting Assistant Professor, Department of Environmental and Biolecular Systems, 2004
Smith, M. W.; Herfort, L.; Tyrol, K.; Campbell, V.; Crump, B. C.; Peterson, T. D.; Zuber, P.; Baptista, A. M.; Simon, H. M. Seasonal changes in bacterial and archaeal gene expression patterns across salinity gradients in the Columbia River coastal margin. Submitted.
Ghindilis, A. L.; Smith, M. W.; Schwarzkopf, K. R.; Zhan, C.; Evans, D. R.; Simon, H. M. 2009. Sensor array: impedimetric label-free sensing of DNA hybridization in real time for rapid, PCR-based detection of microorganisms. Electroanalysis 21: 1459-1468.
Simon, H. M.; Jahn, C. E.; Bergerud, L. T.; Sliwinski, M. K.; Weimer, P. J.; Willis, D. K.; Goodman, R. M. (2005) Cultivation of mesophilic soil crenarchaeotes in enrichment cultures from plant roots. Applied and Environmental Microbiology, 71(8), 4751-4760.
Simon, H. M.; Smith, K. P.; Dodsworth, J. A.; Guenthner, B.; Handelsman, J.; Goodman, R. M. (2001) Influence of tomato genotype on growth of inoculated and indigenous bacteria in the spermosphere. Applied and Environmental Microbiology, 67(2), 514-520.
Simon, H. M.; Gosink, M. M.; Roberts, G. P. (1999) Importance of cis determinants and nitrogenase activity in regulated stability of the Klebsiella pneumoniae nitrogenase structural gene mRNA. Journal of Bacteriology, 181(12), 3751-3760.
Simon, H. M.; Homer, M. J.; Roberts, G. P. (1996) Perturbation of nifT expression in Klebsiella pneumoniae has limited effect on nitrogen fixation. Journal of Bacteriology, 178(10), 2975-2977.
Simon, H. M; Jahn, C. E; Bergerud, L. T.; Sliwinski, M. K.; Weimer, P. J; Willis David K; Goodman Robert M. (2005) Cultivation of mesophilic soil crenarchaeotes in enrichment cultures from plant roots. Applied and environmental microbiology, 71(8), 4751-60.
Simon, H. M.; Smith K. P.; Dodsworth J. A.; Guenthner, B.; Handelsman, J.; Goodman R M (2001) Influence of tomato genotype on growth of inoculated and indigenous bacteria in the spermosphere. Applied and environmental microbiology, 67(2), 514-20.
| Class Number | CRN | Title | Term |
| EBS 505A | 20702 | Reading Group: Environmental and Biomolecular Systems | Winter 2007 |
| EBS 505A | 22056 | Reading Group: Environmental and Biomolecular Systems | Winter 2008 |
| EBS 507A | 22349 | Division Seminar | Winter 2009 |
| EBS 507A | 31986 | Division Seminar | Spring 2009 |
| EBS 515 | 12467 | Environmental and Biomolecular History of the Earth | Fall 2008 |
| EBS 517 | 31603 | Environmental Systems and Human Health | Spring 2008 |
| EBS 517 | 31978 | Environmental Systems and Human Health | Spring 2009 |
| EBS 605A | 22057 | Reading Group: Environmental and Biomolecular Systems | Winter 2008 |
| EBS 607A | 22350 | Division Seminar | Winter 2009 |
| EBS 607A | 31987 | Division Seminar | Spring 2009 |
| EBS 615 | 12468 | Environmental and Biomolecular History of the Earth | Fall 2008 |
| EBS 617 | 31604 | Environmental Systems and Human Health | Spring 2008 |
| EBS 617 | 31979 | Environmental Systems and Human Health | Spring 2009 |